VASUDEV KUMANDURI |
vasu@kisanhub.com |
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D.O.B: 25th November 1975 |
+44 7515537715 |
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https://www.linkedin.com/in/vasudev-kumanduri-a3b7b01/ |
Work Experience |
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VP – Trials – KisanHub |
September 2016 - Present Cambridge –UK |
Responsible for 360 degree development of KisanHub Trials App. Making sure development Operations complement KisanHub requirement and lead industry standards. Main responsibilities are:
- Business vertical and technology management
- Product Management.
- Mentorship
- Infrastructure design.
Lead Scientific Developer / Solution Architect – Inivata Jan 2015–Sept 2016 Cambridge-UK
Implementing cloud architecture and full stack development environment. Main responsibilities were :
- Technology development and management.
- QC / QC, FDA, CLIA compliances
- Product Management.
Lead Scientific Developer – EMBL-EBI Aug 2008 – Nov 2014
Manage resources; design, develop and implement the EGA system for NGS data analysis, submission, archiving and distribution system for handling very large. Main responsibilities were :
- Technology development and management.
- HPC and cluster based solution development
- NGS analysis and QC pipeline implementation.
- Big Data Solution provision
Senior Bioinformatician – Sanger Institute Jan 2007 – Aug 2008 Cambridge-UK
Implement infrastructure for data analysis and data and develop visualisation tools for large-scale genotyping data. Main responsibilities were :
- Genotyping analysis and QC solution.
- Database Solution for genotyping data.
- Data Visualisation tools
Senior Scientific Developer – EMBL-EBI Apr 2004 – Jan 2007
Cambridge-UK Design, develop and implement automated pipeline modules for delineating conserved alternatively spliced features. Establish a basis for the development of an alternative-splicing-conservation pipeline by carrying out genomic and proteomic comparison of multiple species. Main responsibilities were :
- AltSplice and AltTrans development.
- Splice detection automation.
- Cross species feature comparison.
Bioinformatics software engineer - IPK-Germany Sept 2001 to Apr 2004
Developed and implement bioinformatics techniques / software for functional and comparative genomics in barley, and develop a system for the functional annotation. Main responsibilities were:
- EST analysis
- Protein coding frame detection tools.
- Pattern identification
- Databases
Career Summary
- Close to 20 years software development with over 15 years of bioinformatics experience in system architecture, design and development.
- Implemented genomic data analysis, genomic data management, service management & data visualisation projects.
- Proven good relationship management & ability to liaison with key technology developers, collaborators and decision makers.
- Extensive experience in big data-handling, HPC, and database technologies.
- Proven ability to assess needs, set priorities and meet deadlines, collaborating with the larger teams as a creative and enthusiastic self-starter.
- Compliance and regulation adherence knowledge like CLIA, FDA, ISO for medical devices and IVD
Education
- MSc in Bioinformatics - Sheffield Hallam University – 2001
- PG in MIS & Computer Applications - Osmania University - 1999
- BSc in Microbiology, Chemistry - Osmania University - 1997
- Masters Dip in Software Engineering - Aptech – 1997
Published works.
- Genome-wide association study of ankylosing spondylitis identifies non-MHC susceptibility loci.
- A Genome-Wide Association Study Confirms VKORC1, CYP2C9, and CYP4F2 as Principal Genetic Determinants of Warfarin Dose.
- Common variants in the region around Osterix are associated with bone mineral density and growth in childhood.
- AltTrans: Transcript pattern variants annotated for both alternative splicing and alternative polyadenylation.
- ASD: A bioinformatics resource on alternative splicing.
- Bone mineral density, osteoporosis, and osteoporotic fractures: a genome-wide association study.
- ASTD: The Alternative Splicing and Transcript Diversity database.
- DBOra: An Integrated Database for Context Based Search and Browsing in Protein Data.
- WTSI High-throughput Genotyping Quality Assessment & Control.